Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015918545.1_cds_XP_016467983.1_60674
CDS Infomation	[gene=LOC107790559] [db_xref=GeneID:107790559] [protein=probable serine/threonine protein kinase IRE4 isoform X2] [protein_id=XP_016467983.1] [location=complement(join(38960..38972,39367..39455,39922..40007,40168..40348,40616..40708,40787..40927,41007..41099,41801..42044,42119..42291,43606..44841,45085..45276,45408..45499,46734..46953))] [gbkey=CDS]
Sequence	ATGGCGGAACAGAGTCGGACCGGTGGTGGTGAGTCGTCTTCGCCGGAGACCGGAATTCCG ACCGGTTTGAACCGGATTAAGACTAGGCGGCTTGAGTCGAAGGAAAGGCCGAGTTCAAGG CTTGTAGTAGATTCCGATAAGTTGAATGAGTCTCCTCGTTCTGGAGCTTCCACGCCTCGT TTGAAGCAGGATCAAAGAGCTGCCGCAAAAGGACGAAAAGGACACCGTAAAGGCAGGAAG ATAGCTAGTTGGTTTGCGTCATATATCTTTAAGGATTTAGATCAAGCTGGTAGTGGAATT TCCGTAAATCAGGGTACTGACAAGCAGGGTCCTGGAAGGAATGTGCATAAGATGGGGAAG CATGTGACAATGAGGCAATCTTCCCAAGGAGCAATGCCTAATAGTAAAGCAAGCAAAACA TTCAAAAGTTTTTCACACGAGCTAGGTCCAAAAGGTGGAATTCAACCTTCACCTCCGCGA GCTCACAGCTATAATGATCTAAAGGAGCTGATTGGATCTCTTCGTTTAAGATTTGATGCT GCTAAAGAAGCAGTGAACACAGAGCTAGGCGGTTTCTTGCAGGAGGTTGTAGAAATTGTA CAGAAGAATGAGAAGAATGATTCCTTGCCTCTGGATGGACAAAAGATGGCTGGAGAACTT GTTGTTCTTGCTCAAGATTGTATCAAAATGACGTGCTTAGAATTCCGCTCCAAGTGTGAA GCAATTGTCCAGGACCTGACTATGAAAAGACAAGAATGCCAAATGGGTCTTTTGAAATGG TTGTTGACACGCATGCTTTTTATATTGACACGGTGCACAAGGCTGTTGTATTTTGCTAAG GACAGTGAGCCAGTTGATGAGACATCTCTGGCCAAGCTTAAAGAATGTCTAAATAGAATT CCTTCTATTAAAACAGATTGGGTTCTCAAGCGAGGGATATCTGATTCGGAAGCAGGTTGT ACTTTGAACACAAAGGCTGCTGGCAAATGCAGTTCGGAGGAAGAAAAGACTTCGAAATTT TCCTCCCACACACATCAGCAGAAATCTGAATTTCTCTTGGATGGAAGTGTCACTACACTA GAAAAAGATCCCATGTTTATTGAACCAACATCATCTTTTATTAACCATCCTGACATTCAG TCTAACATGAAATCATTAAACCATATCAGCGACCGAATTAGTGGAGAATTGAAAAACGAG TGTAGACAACAGTATTCAGATGATTCTTTGGTGATATGTAGAATTTGTGAGGAACTTGTT CCCACTATTCATTTGGAGCCTCATTCCTATATATGTGCTTATGCAGAGAAATGTGATTCG AAATCTCTAGATGTAGATGAGCGCCTTCTGAAATTTGCAGAGTTACTGGATCAGCTTGTG GAGTCACGTAATTTAGGATTTCATGCAACGTCTGAGATCCAAGAAAATTCAAAAGTGAAA AATGCAAATTCTGGGAATACATCTGAAGGTTATTCACCAAATATGGGTGAGTGGAGAAGC AAAGGGATAGATGGAATGTTTGAGGATCTTCATGAGATGGATACGGCCAGTATAGAAGAT TCTCCATTAGCAGCATTCGTTAATTTGAAGAGTCACTTGGGTGCAAAGTTTAATCATTGT GGTCCACCATCTTCAACAGGGAGCATGACATCAGTATCCTCCACAAATACCCCTCGGGCA GTAAATTTTGACTTCTGGTTAGAGCATAGCAATCTTTCTGAGCTAGAGGATGTCCAGCAG ATGGCTGATTTAGCAGATATTGCACGTTGTGCGGCCGGCACAGATCTTTCAGAAGAAGGA TCTCATGAGCTTTTAATTGCTTTCATGCAAGACCTACAATATACTTTACAAAATAACAAG CTAAAAGCTCTTGTAGTAGATACATTTGGGGGACGAATAGAGAACCTTTTGCGAGAGAAA TATATACTTGCTTGTGATCTAGTGGGTAGAAAAGACGGTTTTGGAAATTCAGAAGGCTCC AAAATATTAGTGGATAATTCATCTCATTCCAGTATAATGTCAACTCCTTCAAGTTCATCA CACAAAGAAAGAACAAGCATTGATGATTTTGAGATTATCAAACCAATCAGCAGAGGTGCC TTTGGCAGAGTTTTTCTGGCACGCAAGCGGTCAACTGGAGATTTATTTGCAATTAAGGTG CTCAAGAAATTAGATTTGTTGCGAAAGAATGATATTGAGCGCATATTGGCAGAACGCAAT ATATTGATTACTGTCAGAAACCCTTTTGTGGTCCGATTTTTTTATTCATTCACCAGCAGA GACTACCTTTATTTGGTCATGGAGTATCTTAATGGCGGTGATCTATTCTCTCTGCTTAAA AAAGTTGGTTGCCTTGAGGAAGATGTAGCTCGAACCTATGTCGCGGAATTGGTCCTTGCT CTGGAGTACCTTCATTCTTTAGGAATCGTCCATCGTGATCTCAAGCCAGACAACATATTA ATTGCCCAAGATGGGCATATAAAGCTTACAGATTTTGGTTTGTCGAAAATTGGACTAATG AACAGTACGGATGATCTATCTGGACCCGACACAAAGGATGTAGTGCTTCCTGATGTTCCA GATCATCTATTGGACAAATCTCAACGGTCAGCTGTTGGTACCCCTGACTATTTGGCTCCG GAAATTCTTCTTGGAACTGAGCATGGTAGCGCTGCTGATTGGTGGTCAGTAGGAATCATT TTGTTCGAACTCATCACTGGGTTTCCGCCTTTCAATGCCGAGCACCCTGAGGTTATCTTT GATAATATTCTTAACAAGCAAATCCCCTGGCCCTTTGTCCCAGAAGAGATGTCCCTTGAG GCACAAGACTTGATTGACAGAGCTTTATTGTAG

Peptide Sequence

PEP ID	XP_016467983.1
PEP Infomation	PREDICTED: probable serine/threonine protein kinase IRE4 isoform X2 [Nicotiana tabacum]
Sequence	MAEQSRTGGGESSSPETGIPTGLNRIKTRRLESKERPSSRLVVDSDKLNESPRSGASTPR LKQDQRAAAKGRKGHRKGRKIASWFASYIFKDLDQAGSGISVNQGTDKQGPGRNVHKMGK HVTMRQSSQGAMPNSKASKTFKSFSHELGPKGGIQPSPPRAHSYNDLKELIGSLRLRFDA AKEAVNTELGGFLQEVVEIVQKNEKNDSLPLDGQKMAGELVVLAQDCIKMTCLEFRSKCE AIVQDLTMKRQECQMGLLKWLLTRMLFILTRCTRLLYFAKDSEPVDETSLAKLKECLNRI PSIKTDWVLKRGISDSEAGCTLNTKAAGKCSSEEEKTSKFSSHTHQQKSEFLLDGSVTTL EKDPMFIEPTSSFINHPDIQSNMKSLNHISDRISGELKNECRQQYSDDSLVICRICEELV PTIHLEPHSYICAYAEKCDSKSLDVDERLLKFAELLDQLVESRNLGFHATSEIQENSKVK NANSGNTSEGYSPNMGEWRSKGIDGMFEDLHEMDTASIEDSPLAAFVNLKSHLGAKFNHC GPPSSTGSMTSVSSTNTPRAVNFDFWLEHSNLSELEDVQQMADLADIARCAAGTDLSEEG SHELLIAFMQDLQYTLQNNKLKALVVDTFGGRIENLLREKYILACDLVGRKDGFGNSEGS KILVDNSSHSSIMSTPSSSSHKERTSIDDFEIIKPISRGAFGRVFLARKRSTGDLFAIKV LKKLDLLRKNDIERILAERNILITVRNPFVVRFFYSFTSRDYLYLVMEYLNGGDLFSLLK KVGCLEEDVARTYVAELVLALEYLHSLGIVHRDLKPDNILIAQDGHIKLTDFGLSKIGLM NSTDDLSGPDTKDVVLPDVPDHLLDKSQRSAVGTPDYLAPEILLGTEHGSAADWWSVGII LFELITGFPPFNAEHPEVIFDNILNKQIPWPFVPEEMSLEAQDLIDRALL

Transcript Sequence

Gene sequence data has not been registered.